Structure of PDB 7d6n Chain D

Receptor sequence
>7d6nD (length=589) Species: 11084 (Tick-borne encephalitis virus) [Search protein sequence]
KVKEKDVQERISALREQYGETWHMDREHPYRTWQYWGSYRTAPTGSAASL
INGVVKLLSWPWNAREDVVRMAMTDTTAFGQQRVFKEKVDTKAQEPQPGT
KVIMRAVNDWILERLARKSKPRMCSREEFIAKVKSNQNRWSSAKEAVEDP
AFWQLVDEERERHLAGRCAHCVYNMMWYMWLGSRFLEFEALGFLNEDHWA
SRGSSGSGVEGISLNYLGWYLKGLSTLEGGLFYADDTAGWDTKVTNADLE
DEEQLLRYMEGEHKQLAATIMQKAYHAKVVKVARPSRDGGCVMDVITRRD
QRGSGQVVTYALNTLTNIKVQLIRMMEGEGVIEASDAHNPRLLRVERWLR
DHGEERLGRMLVSGDDCVVRPVDDRFSRALYFLNDMAKTRKDIGEWEHSV
GFSNWEEVPFCSHHFHELVMKDGRALIVPCRDQDELVGRARVSPGCGWSV
RETACLSKAYGQMWLLSYFHRRDLRTLGLAICSAVPIDWVPTGRTTWSIH
ASGAWMTTEDMLDVWNRVWILDNPFMHSKEKIVEWRDVPYLPKSHDMLCS
SLVGRKERAEWAKNIWGAVEKVRKMIGQEKFKDYLSCMD
3D structure
PDB7d6n Crystal structure of tick-borne encephalitis virus
ChainD
Resolution3.168 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.91: flavivirin.
3.6.1.15: nucleoside-triphosphate phosphatase.
3.6.4.13: RNA helicase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN D H715 C729 H416 C430
BS02 ZN D E439 H443 C448 C451 E159 H163 C168 C171
BS03 MG D D535 D665 D236 D366
Gene Ontology
Molecular Function
GO:0003968 RNA-dependent RNA polymerase activity
GO:0005524 ATP binding
Biological Process
GO:0039694 viral RNA genome replication

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7d6n, PDBe:7d6n, PDBj:7d6n
PDBsum7d6n
PubMed
UniProtK4P8A2

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