Structure of PDB 7c7a Chain D

Receptor sequence
>7c7aD (length=251) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
DRTQTFIKDCLFTKCLEDPEKPFNENRFQDTLLLLPTDESADKQLEKRDY
QRINKNSKIALREYINNCKKNTKKCLKLAYENKITDKEDLLHYIEEKHPT
IYESLPQYVDFVPMYKELWINYIKELLNITKNLKTFNGSLALLKLSMADY
NGALLRVTKSKNKTLIGLQGIVIWDSQKFFIMIVKGNIIDEIKCIPKKGT
VFQFEIPISDDDDSALRYSILGDRFKYRSVDRAGRKFKSRRCDDMLYYIQ
N
3D structure
PDB7c7a Structural insight into precursor ribosomal RNA processing by ribonuclease MRP.
ChainD
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D T38 K75 Y78 Q79 K86 R90 N94 K97 K101 K105 N190 T192 W202 K221 Y255 K266 R268 R269 T37 K47 Y50 Q51 K58 R62 N66 K69 K73 K77 N162 T164 W174 K193 Y227 K238 R240 R241
Gene Ontology
Molecular Function
GO:0000171 ribonuclease MRP activity
GO:0003723 RNA binding
GO:0004526 ribonuclease P activity
GO:0005515 protein binding
GO:0033204 ribonuclease P RNA binding
GO:0042134 rRNA primary transcript binding
Biological Process
GO:0000294 nuclear-transcribed mRNA catabolic process, RNase MRP-dependent
GO:0000460 maturation of 5.8S rRNA
GO:0001682 tRNA 5'-leader removal
GO:0006364 rRNA processing
GO:0006396 RNA processing
GO:0008033 tRNA processing
GO:0034965 intronic box C/D snoRNA processing
Cellular Component
GO:0000172 ribonuclease MRP complex
GO:0005634 nucleus
GO:0005655 nucleolar ribonuclease P complex
GO:0030677 ribonuclease P complex

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Cellular Component
External links
PDB RCSB:7c7a, PDBe:7c7a, PDBj:7c7a
PDBsum7c7a
PubMed32586950
UniProtP38336|POP4_YEAST RNases MRP/P 32.9 kDa subunit (Gene Name=POP4)

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