Structure of PDB 7apd Chain D

Receptor sequence
>7apdD (length=287) Species: 10571 (Bovine papillomavirus) [Search protein sequence]
TEKFDFGTMVQWAYDHKYAEESKIAYEYALAAGSDSNARAFLATNSQAKH
VKDCATMVRHYLRAETQALSMPAYIKARCKLATGEGSWKSILTFFNYQNI
ELITFINALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGGSVLSF
ANHKSHFWLASLADTRAALVDDATHACWRYFDTYLRNALDGYPVSIDRKH
KAAVQIKAPPLLVTSNIDVQAEDRYLYLHSRVQTFRFEQPCTDESGEQPF
NITDADWKSFFVRLWGRLDLIDEEEDSEEDGDSMRTF
3D structure
PDB7apd Unwinding of a DNA replication fork by a hexameric viral helicase.
ChainD
Resolution3.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.12: DNA helicase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D K506 H507 K199 H200
BS02 dna D T308 R346 A347 L349 A350 T351 N352 T1 R39 A40 L42 A43 T44 N45
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003678 DNA helicase activity
GO:0005524 ATP binding
Biological Process
GO:0006260 DNA replication

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Molecular Function
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Biological Process
External links
PDB RCSB:7apd, PDBe:7apd, PDBj:7apd
PDBsum7apd
PubMed34545080
UniProtP03116|VE1_BPV1 Replication protein E1 (Gene Name=E1)

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