Structure of PDB 7a24 Chain D

Receptor sequence
>7a24D (length=177) Species: 3712 (Brassica oleracea) [Search protein sequence]
DDEEAEQLAKEISKDWSTVFERSMNTLFLTEMVRGLSLTLKYFFDPKVTI
NYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQAITIEAEE
REDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELL
YDKEKLLENGDRWETEIAENLRSESLY
3D structure
PDB7a24 Specific features and assembly of the plant mitochondrial complex I revealed by cryo-EM.
ChainD
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 7.1.1.2: NADH:ubiquinone reductase (H(+)-translocating).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SF4 D H111 C133 P134 I138 C162 I163 Y164 C165 C168 H67 C89 P90 I94 C118 I119 Y120 C121 C124
BS02 SF4 D C123 I124 A125 C126 K127 L128 C129 I140 Y155 C172 P173 A176 I177 C79 I80 A81 C82 K83 L84 C85 I96 Y111 C128 P129 A132 I133
Gene Ontology
Molecular Function
GO:0008137 NADH dehydrogenase (ubiquinone) activity
GO:0016491 oxidoreductase activity
GO:0016651 oxidoreductase activity, acting on NAD(P)H
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005634 nucleus
GO:0005739 mitochondrion
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7a24, PDBe:7a24, PDBj:7a24
PDBsum7a24
PubMed33060577
UniProtQ9FX83|NDS8B_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial (Gene Name=At1g16700)

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