Structure of PDB 6zlz Chain D

Receptor sequence
>6zlzD (length=346) Species: 493803 (Merkel cell polyomavirus) [Search protein sequence]
IPKPGCCPNVASVPKLLVKGGVEVLSVVTGEDSITQIELYLNPRMGVNSP
DLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCD
TLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAI
GGEPLDLQGLVLDYQTQYPKTTNGGPITIETVLGRKMTPKNQGLDPQAKA
KLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLL
DENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWV
KNPYPVVNLINSLFSNLMPKVSGQPMEGKDNQVEEVRIYEGSEQLP
3D structure
PDB6zlz Structure of Merkel Cell Polyomavirus Capsid and Interaction with Its Glycosaminoglycan Attachment Receptor.
ChainD
Resolution3.52 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA D S236 E239 S218 E221
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
GO:0046872 metal ion binding
Cellular Component
GO:0019028 viral capsid
GO:0042025 host cell nucleus
GO:0044423 virion component

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6zlz, PDBe:6zlz, PDBj:6zlz
PDBsum6zlz
PubMed32699083
UniProtB0G0W3

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