Structure of PDB 6xny Chain D

Receptor sequence
>6xnyD (length=345) Species: 10090 (Mus musculus) [Search protein sequence]
MALQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDI
KQNHLKLKPAIFSKDSCYLPPLRYPATCSYKKHQYIIHGGKTPNNELSDK
IYIMSVACKNNKKVTFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLF
GGRSYMPSTQRTTEKWNSVADCLPHVFLIDFEFGCATSYILPELQDGLSF
HVSIARNDTVYILGGHSLASNIRPANLYRIRVDLPLGTPAVNCTVLPGGI
SVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEISEMETPD
WTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCS
3D structure
PDB6xny Structural basis for the activation and suppression of transposition during evolution of the RAG recombinase.
ChainD
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D A338 M339 S340 A332 M333 S334
BS02 dna D K38 R39 M339 K38 R39 M333
BS03 dna D K58 K119 K58 K113
Gene Ontology
Biological Process
GO:0006310 DNA recombination
Cellular Component
GO:0005634 nucleus

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Cellular Component
External links
PDB RCSB:6xny, PDBe:6xny, PDBj:6xny
PDBsum6xny
PubMed32945578
UniProtP21784|RAG2_MOUSE V(D)J recombination-activating protein 2 (Gene Name=Rag2)

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