Structure of PDB 6x3m Chain D

Receptor sequence
>6x3mD (length=349) Species: 12366 (Streptococcus pyogenes phage H4489A) [Search protein sequence]
LRVQFKRMSADEWARSDVILLEGEIGFETDTGFAKFGDGQNTFSKLKYLT
GPKGPKGDTGLQGKTGGTGPRGPAGKPGTTDYDQLQNKPDLGAFAQKEET
NSKITKLESSKADKSAVYSKAESKIELDKKLSLTGGIVTGQLQFKPNKSG
IKPSSSVGGAINIDMSKSEGAAMVMYTNKDTTDGPLMILRSDKDTFDQSA
QFVDYSGKTNAVNIVMRQPSAPNFSSALNITSANEGGSAMQIRGVEKALG
TLKITHENPNVEAKYDENAAALSIDIVKKQKGGKGTAAQGIYINSTSGTA
GKMLRIRNKNEDKFYVGPDGGFHSGANSTVAGNLTVKDPTSGKHATKDY
3D structure
PDB6x3m Crystal Structure of Streptococcal Bacteriophage Hyaluronidase: Presence of a Prokaryotic Collagen and Elucidation of Catalytic Mechanism
ChainD
Resolution3.581 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.35: hyaluronoglucosaminidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BDP D N235 T237 N229 T231
BS02 BDP D Q295 Y298 Q289 Y292
Gene Ontology
Molecular Function
GO:0004415 hyalurononglucosaminidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0045227 capsule polysaccharide biosynthetic process
GO:0046718 symbiont entry into host cell
GO:0098994 symbiont entry into host cell via disruption of host cell envelope
GO:0098996 symbiont entry into host cell via disruption of host cell glycocalyx
Cellular Component
GO:0044423 virion component

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Molecular Function
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Cellular Component
External links
PDB RCSB:6x3m, PDBe:6x3m, PDBj:6x3m
PDBsum6x3m
PubMed
UniProtP15316|HYLP1_BPH44 Hyaluronoglucosaminidase (Gene Name=HYLP1)

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