Structure of PDB 6wde Chain D

Receptor sequence
>6wdeD (length=46) Species: 562 (Escherichia coli) [Search protein sequence]
MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
3D structure
PDB6wde Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading.
ChainD
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D M1 K2 R3 T4 F5 Q6 P7 S8 V9 L10 K11 R12 N13 R14 H16 G17 F18 R19 R21 K25 N26 Q29 R33 R34 K37 R39 A40 M1 K2 R3 T4 F5 Q6 P7 S8 V9 L10 K11 R12 N13 R14 H16 G17 F18 R19 R21 K25 N26 Q29 R33 R34 K37 R39 A40
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:6wde, PDBe:6wde, PDBj:6wde
PDBsum6wde
PubMed32612237
UniProtP0A7P5|RL34_ECOLI Large ribosomal subunit protein bL34 (Gene Name=rpmH)

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