Structure of PDB 6vqo Chain D

Receptor sequence

>6vqoD (length=193) Species: 9606 (Homo sapiens) [Search protein sequence]

KEVEQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTY
SSGNKEDGRFTAQVDKSSKYISLFIRDSQPSDSATYLCAMSGLKEDSSYK
LIFGSGTRLLVRPDIQNPDPAVYQLRDKSVCLFTDFDSQTNVSQSKDSDV
YITDKCVLDMRSMDFKSNSAVAWSNFACANAFNNSIIPEDTFF

3D structure

PDB

6vqo Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.

Chain

Resolution

3.0 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	Y32 Y100	Y31 Y99

External links

PDB	RCSB:6vqo, PDBe:6vqo, PDBj:6vqo
PDBsum	6vqo
PubMed	32518267

[Back to BioLiP]