Structure of PDB 6vc6 Chain D

Receptor sequence
>6vc6D (length=433) Species: 1871030 (Merdibacter massiliensis) [Search protein sequence]
KKYNVCIVGGGSTYTPGFLKSFVRLQNEFPMEKLVLFDIDAERQQPIGEF
GKILFSERFPELDFSYTTDPAEAYKDMDFIFMQMRAGGLPMRREDEHISL
HLGRIGQETCGAGGMAYGLRSCVDMIESIHQIRQYSPNAWILNYSNPAAI
VAEALRREFPDDNRILNICDQPENIMRSVSRLLNVSWEDLDPVYFGLNHY
GWFTHVYDRKTGEDLLPEIKKIIKEKGFLPQDAEQRDQSWLDTYGFVQTM
MEDFPDFLPNTYDGYYLYPDYKFSHLNPDYTRADEVIDGREKRVFAECRE
VIARGELGDAHAEMMIKVAEAIAYNKNTRFIVIVKNEGAIANMQDDAMVE
LVCELGINGPRRMAVGNIPQFYLGLLVQQVSSEKLLVDAYYEHSYQKALE
AFTLNRLINDAKKAREILDAMIEVNKGMWPELK
3D structure
PDB6vc6 2.1 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Gut Microorganisms in Complex with NAD and Mn2+
ChainD
Resolution2.133 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN D C170 H200 C169 H199
BS02 G6P D R93 E109 N147 D171 H200 W241 Y263 R283 R291 R92 E108 N146 D170 H199 W240 Y262 R282 R290
BS03 NAD D G12 S13 T14 Y15 D39 I40 R44 Q84 M85 R86 D125 Y145 N147 C170 D171 H319 G11 S12 T13 Y14 D38 I39 R43 Q83 M84 R85 D124 Y144 N146 C169 D170 H311
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Tue Nov 26 00:03:37 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6vc6', asym_id = 'D', title = '2.1 Angstrom Resolution Crystal Structure of 6-p...m Gut Microorganisms in Complex with NAD and Mn2+'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6vc6', asym_id='D', title='2.1 Angstrom Resolution Crystal Structure of 6-p...m Gut Microorganisms in Complex with NAD and Mn2+')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003824,0004553,0005975,0016616', uniprot = '', pdbid = '6vc6', asym_id = 'D'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003824,0004553,0005975,0016616', uniprot='', pdbid='6vc6', asym_id='D')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>