Structure of PDB 6vbq Chain D

Receptor sequence

>6vbqD (length=208) Species: 9606 (Homo sapiens) [Search protein sequence]

ELTQPPSMSVSPGQTARITCSADVLPKQYAYWYQQKPGQAPLLLIYKDTE
RPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSTDSSDIYLVFGGG
TKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKA
DSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS
TVEKTVAP

3D structure

PDB

6vbq HIV vaccine delayed boosting increases Env variable region 2-specific antibody effector functions.

Chain

Resolution

2.116 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	L28 K30 Q31 Y32 D51 T91 D95 I95A	L25 K27 Q28 Y29 D48 T88 D92 I93

External links

PDB	RCSB:6vbq, PDBe:6vbq, PDBj:6vbq
PDBsum	6vbq
PubMed	31996483

[Back to BioLiP]