Structure of PDB 6v29 Chain D

Receptor sequence
>6v29D (length=310) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
HLPNITILATGGTIAVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVW
LTLAKKINTDCDKTDGFVITHGVDTMEETAYFLDLTVKCDKPVVMVGAMR
PSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTTTNTT
DVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGI
VYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKTGTA
VVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDP
QQIQQIFNQY
3D structure
PDB6v29 Mechanism of Catalysis by l-Asparaginase.
ChainD
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) T12 V89 D90 T162 E283
Catalytic site (residue number reindexed from 1) T13 V73 D74 T146 E267
Enzyme Commision number 3.5.1.1: asparaginase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ASP D G57 S58 Q59 G88 V89 D90 G41 S42 Q43 G72 V73 D74
Gene Ontology
Molecular Function
GO:0004067 asparaginase activity
GO:0016787 hydrolase activity
GO:0042802 identical protein binding
Biological Process
GO:0006520 amino acid metabolic process
GO:0006528 asparagine metabolic process
GO:0006530 asparagine catabolic process
GO:0051289 protein homotetramerization
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space
GO:0032991 protein-containing complex
GO:0042597 periplasmic space

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Biological Process
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Cellular Component
External links
PDB RCSB:6v29, PDBe:6v29, PDBj:6v29
PDBsum6v29
PubMed32364696
UniProtP00805|ASPG2_ECOLI L-asparaginase 2 (Gene Name=ansB)

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