Structure of PDB 6v1s Chain D

Receptor sequence
>6v1sD (length=273) Species: 1496 (Clostridioides difficile) [Search protein sequence]
DEDLDTDNDNIPDSYERNGYTIKDLIAVKWEDSFAEQGYKKYVSNYLESN
TAGDPYTDYEKASGSFDKAIKTEARDPLVAAYPIVGVGMEKLIISTNENK
GESAYINANVRYYNTGTAPMYKVTPTTNLVLDGDTLSTIKAQENQIGNNL
SPGDTYPKKGLSPLALNTMDQFSSRLIPINYDQLKKLDAGKQIKLETTQV
SGNFGTKNSSGQIVTEGNSWSDYISQIDSISASIILDTENESYERRVTAK
NLQDPEDKTPELTIGEAIEKAFG
3D structure
PDB6v1s Structural elucidation of theClostridioides difficiletransferase toxin reveals a single-site binding mode for the enzyme.
ChainD
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA D D222 D224 E231 N260 E263 D273 D7 D9 E16 N45 E48 D58
BS02 CA D D220 D222 D224 I226 E231 D5 D7 D9 I11 E16
Gene Ontology
Biological Process
GO:0051260 protein homooligomerization
Cellular Component
GO:0005576 extracellular region

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Biological Process
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Cellular Component
External links
PDB RCSB:6v1s, PDBe:6v1s, PDBj:6v1s
PDBsum6v1s
PubMed32123082
UniProtA8DS70

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