Structure of PDB 6v18 Chain D

Receptor sequence

>6v18D (length=206) Species: 10090 (Mus musculus) [Search protein sequence]

GDSVTQTEGQVTVSESKSLIINCTYSATSIAYPNLFWYVRYPGEGLQLLL
KVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALSDSGSF
NKLTFGAGTRLAVCPYIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVS
QSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPED
TFFPSP

3D structure

PDB

6v18 The shared susceptibility epitope of HLA-DR4 binds citrullinated self-antigens and the TCR.

Chain

Resolution

2.35 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	Y32 S109	Y32 S97

External links

PDB	RCSB:6v18, PDBe:6v18, PDBj:6v18
PDBsum	6v18
PubMed	33863750

[Back to BioLiP]