Structure of PDB 6ut5 Chain D

Receptor sequence
>6ut5D (length=395) Species: 187878 (Thermococcus gammatolerans) [Search protein sequence]
GHNIKEDYFRVDMLLNKKGQVILYGPPGTGKTWIARKYVVEETNEKTPGN
KWEFITFHQSYSYEEFIEGFRPRTDNEEKIRYVVEDGIFKKIALRALVKG
LFELEDATIGKDKIHRLYILLTKKEPLSPTEYEEYLRLKRYLWELVGGLP
KDKLKNLTPKFYLIIDEINRGNISKIFGELITLLEKDKRLGGENQLIVRL
PYSGEPFAVPPNLYIIGTMNTADRSIALLDVALRRRFAFIEVEPRPEFLE
KENLKKIREKKLKTEDRKRLNEKLNELFSKLGNDNYFLKTLLEKINVRIT
VVKDRDHRIGHSYFLNVETVEDLHHVWYYEVLPLLMEYFYNDWETIKWVL
NEKGKEHGNVFFEKLRLTGPNGEEAYQLKVLEGDAFIGALKRIIS
3D structure
PDB6ut5 Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes
ChainD
Resolution2.44 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GSP D E375 D377 K378 N384 R425 R426 E185 D187 K188 N194 R235 R236
BS02 GSP D N193 P217 G218 G220 K221 T222 W223 F438 S502 L505 N3 P27 G28 G30 K31 T32 W33 F248 S312 L315
BS03 MG D T222 D356 T32 D166
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6ut5, PDBe:6ut5, PDBj:6ut5
PDBsum6ut5
PubMed33219217
UniProtC5A3Z3

[Back to BioLiP]