Structure of PDB 6qsk Chain D

Receptor sequence
>6qskD (length=294) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
ANSGPISILSYCGSSILMTVTNKFVVNLKDFNMNFVMLFVQSLVCTITLI
ILRILGFRSLNKTDAKNWFPISFLLVLMIYTSSKALQYLAVPIYTIFKNL
TIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWGDQQFNPGYFWMF
TNCITSALFVLIMRKRIKLTNFKDFDTMFYNNVLALPILLLFSFCVEDWS
SVNLTNNFSNDSLTAMIISGVASVGISYCSGWCVRVTSSTTYSMVGALNK
LPIALSGLIFFDAPRNFLSILSIFIGFLSGIIYAVAKQKKQQAQ
3D structure
PDB6qsk Structural basis for substrate specificity and regulation of nucleotide sugar transporters in the lipid bilayer.
ChainD
Resolution3.394 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 5GP D M98 S269 Y281 K289 M78 S230 Y242 K250
Gene Ontology
Molecular Function
GO:0005458 GDP-mannose transmembrane transporter activity
GO:0015297 antiporter activity
Biological Process
GO:0055085 transmembrane transport
GO:1990570 GDP-mannose transmembrane transport
Cellular Component
GO:0000139 Golgi membrane
GO:0005739 mitochondrion
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0005794 Golgi apparatus
GO:0016020 membrane
GO:0030659 cytoplasmic vesicle membrane
GO:0031410 cytoplasmic vesicle

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6qsk, PDBe:6qsk, PDBj:6qsk
PDBsum6qsk
PubMed31604945
UniProtP40107|GMT1_YEAST GDP-mannose transporter 1 (Gene Name=VRG4)

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