Structure of PDB 6pzq Chain D

Receptor sequence
>6pzqD (length=156) Species: 11259 (Human respiratory syncytial virus A2) [Search protein sequence]
RNPCKFEIRGHCLNGKRCHFSHNYFEWPPHALLVRQNFMLNRILKSMDRT
EEYALGVVGVLESYIGSINNITKQSACVAMSKLLTELNSDDIKKLRDNEE
LNSPKIRVYNTVISYIESNRKNNKQTIHLLKRLPADVLKKTIKNTLDIHK
SITINN
3D structure
PDB6pzq Structure of the Human Respiratory Syncytial Virus M2-1 Protein in Complex with a Short Positive-Sense Gene-End RNA.
ChainD
Resolution2.703 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN D C7 C15 C21 H25 C4 C12 C18 H22
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005198 structural molecule activity
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0019083 viral transcription
GO:0031564 transcription antitermination
GO:0046782 regulation of viral transcription
GO:0085033 symbiont-mediated activation of host NF-kappaB cascade
Cellular Component
GO:0030430 host cell cytoplasm
GO:0042025 host cell nucleus
GO:0044423 virion component

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6pzq, PDBe:6pzq, PDBj:6pzq
PDBsum6pzq
PubMed32697936
UniProtP04545|M21_HRSVA Protein M2-1 (Gene Name=M2-1)

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