Structure of PDB 6prm Chain D

Receptor sequence

>6prmD (length=446) Species: 1872678 (Pseudoalteromonas fuliginea) [Search protein sequence]

KPNIVLIFADDAGFGDFGFQGSTQLKTPNLDKLAQSGVRFTQGYVSDSTC
GPSRAGLMTGKYQQRFGYEEINVPGFMSGNSALKGADMGLPLDQKTMGDY
LKEQGYKTAVFGKWHLGDADRFHPLKRGFDTFLGFRGGDRSYFNYSEQEM
KNGNKHFFDKKLERDFGNYEEPKEYLTDVLGKEAAKYIEQNKDEPFFIYL
AFNAVHTPLESDPKDLAKFPNLTGKRKELAAMTLGLDRASGYVLDKLKEL
GLDDNTIVVFSNDNGGPSDKNASNNAPLAGTKSNQLEGGIRVPFLISWPK
HIKPGSTYDYPVSTLDLLPTFYSAAKGKALGSDIDGVDLLPYIQGENTAR
PHKVMYWKKENRAVIRDNDWKLIRYPDRPAELYDLSSDISEQTDLAAKNP
ERVKTMFKSLFEWELTLERPRWLLKRKYEKYDIDRMDKYRLPATQP

3D structure

PDB

6prm Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.

Chain

Resolution

2.5 Å

3D
structure

Catalytic site residues are labeled in the structure
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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	D	D37 D38 C77 D290 N291	D10 D11 C50 D263 N264

External links

PDB	RCSB:6prm, PDBe:6prm, PDBj:6prm
PDBsum	6prm
PubMed	31886414

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