Structure of PDB 6peu Chain D

Receptor sequence

>6peuD (length=380) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence]

YKLASYRICSPEETFEKIQEALKKIETVEIKNIQHLDKVNIPVYYLKRRV
VVDGKEGIAIHYGKGANDIQAKVSACMEAIERFSASYDKNKVKEKPDNPI
NVEDLILPQYADKNVKEWVEGIDIINNETIDVPADAVFYPTSGKLFRGNT
NGLASGNNLDEAILHATLEIIERDAWSLADLARKIPTKINPEDAKNPLIH
ELIEKYEKAGVKIILKDLTSEFEIPVVAAISDDLSKNPLMLCVGVGCHLH
PEIAILRALTEVAQSRASQLHGFRRDAKLREEFTSKIPYERLKRIHRKWF
EFEGEINIADMPNNARYDLKKDLKFIKDKLSEFGFDKLIYVDLNKVGVDA
VRVIIPKMEVYTIDRDRLSRRAFERVKKLY

3D structure

PDB

6peu Mechanistic Basis for Ribosomal Peptide Backbone Modifications.

Chain

Resolution

1.95 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	D	F287 K290 R295	F283 K286 R291
BS02	peptide	D	Y66 E82 Y143 P144 T145 R151 G152 N153 T154 R177 L245 C246 V247 E265 Q268 S269 R278 R284 I291 L296 H300 I367	Y62 E78 Y139 P140 T141 R147 G148 N149 T150 R173 L241 C242 V243 E261 Q264 S265 R274 R280 I287 L292 H296 I363
BS03	ATP	D	R11 K68 Q74 V77 S78 M81 E85 A158 S159 N161 H169 E173 E176 E265	R7 K64 Q70 V73 S74 M77 E81 A154 S155 N157 H165 E169 E172 E261
BS04	MG	D	E176 V249 E265	E172 V245 E261

External links

PDB	RCSB:6peu, PDBe:6peu, PDBj:6peu
PDBsum	6peu
PubMed	31139720
UniProt	Q58494\|Y1094_METJA Uncharacterized protein MJ1094 (Gene Name=MJ1094)

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