Structure of PDB 6pef Chain D

Receptor sequence

>6pefD (length=219) Species: 9544 (Macaca mulatta) [Search protein sequence]

VQLQESGPAVMKPSETLSLTCAVSGGSISGDYGWSWIRQAPGKGLEWIAI
IFGSSGSTYYSPSLKSRVTISKDTSKNQFSLKLNSVTAADTAVYFCAGSP
VRQREQDYWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKD
YFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTY
VCNVNHKPSNTKVDKRVEI

3D structure

PDB

6pef Modular recognition of antigens provides a mechanism that improves vaccine-elicited antibody-class frequencies

Chain

Resolution

2.004 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	S100 R105 D108	S99 R104 D107

External links

PDB	RCSB:6pef, PDBe:6pef, PDBj:6pef
PDBsum	6pef
PubMed

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