Structure of PDB 6p8v Chain D

Receptor sequence
>6p8vD (length=303) Species: 749537 (Escherichia coli MS 115-1) [Search protein sequence]
VKPSLDELFERRINFPDFEPQERLARLVGLDEHKDRLSKILGLLVNPYGI
QEWAKKYHPDARAAVDTVLRRPPLVVLAGDVGSGKTELAETIGDAVARQE
DIDITLYPLSLATRGQGRVGEMTQLVSAAFDYTIEAADKLKKARGAVLLL
IDQADALAQSRENAQMHHEDRAGVNAFIRGIDRIANQKLPAAVLMCTNRL
KALDPAVQRRAAEILTFSRPNDEQRHYLLHSKLTGLGLNSTAVEELVRLT
GPRDPNSPGFTFSDITQRLIPSIILAAYPYNAVSVHSALQVVNKMTPTPA
FID
3D structure
PDB6p8v HORMA Domain Proteins and a Trip13-like ATPase Regulate Bacterial cGAS-like Enzymes to Mediate Bacteriophage Immunity.
ChainD
Resolution2.64 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP D R215 R216 R209 R210
BS02 ATP D L29 V30 L32 G84 S85 G86 K87 T88 E89 F268 T272 Q273 L27 V28 L30 G82 S83 G84 K85 T86 E87 F262 T266 Q267
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0051607 defense response to virus
Cellular Component
GO:0015630 microtubule cytoskeleton

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6p8v, PDBe:6p8v, PDBj:6p8v
PDBsum6p8v
PubMed31932165
UniProtD7Y2H4|CAP6_ECOM1 CD-NTase-associated protein 6 (Gene Name=cap6)

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