Structure of PDB 6p8j Chain D

Receptor sequence
>6p8jD (length=300) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]
ALSIDEAFRKFKSRLELNEREQKNASQRQNEVRDYLQTKFGIARSFLTGS
YARYTKTKPLKNINIFFVLKDSEKHYHGKAASVVLDDFHSALVEKYGSAA
VRKQARSINVDFGVHIDAEDNTDYRVVSVDAVPAFDTGDQYEIPDTASGK
WIKTDPEIHKDKATAAHQAYANEWKGLVRMVKYWNNNPKHGDLKPVKPSF
LIEVMALECLYGGWGGSFDREIQSFFATLADRVHDEWPDPAGLGPAISND
MDAARKQRAQQLLFQASQDASIAIDHARRGRNIEALRAWRALFGPKFPLS
3D structure
PDB6p8j HORMA Domain Proteins and a Trip13-like ATPase Regulate Bacterial cGAS-like Enzymes to Mediate Bacteriophage Immunity.
ChainD
Resolution1.47 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.85: diadenylate cyclase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP D G49 S50 R53 K56 N64 T154 H159 K182 S199 F200 D239 P245 I247 G49 S50 R53 K56 N64 T154 H159 K182 S199 F200 D239 P245 I247
BS02 MG D N62 N64 D130 N62 N64 D130
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016779 nucleotidyltransferase activity
GO:0046872 metal ion binding
GO:0106408 diadenylate cyclase activity
Biological Process
GO:0009117 nucleotide metabolic process
GO:0051607 defense response to virus

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6p8j, PDBe:6p8j, PDBj:6p8j
PDBsum6p8j
PubMed31932165
UniProtP0DTF7|CDND_PSEAI Cyclic AMP-AMP-AMP synthase (Gene Name=cdnD)

[Back to BioLiP]