Structure of PDB 6p4f Chain D

Receptor sequence
>6p4fD (length=373) Species: 273063 (Sulfurisphaera tokodaii str. 7) [Search protein sequence]
MGLPWELARFSIVKDEVLPHFATNEDLDLANEIISLFKAGKKLGEIDEEI
EYLEKIYDHKLVRAFVKLLTRLCEFELDSPIPPIQIRRELFKYGPVLDEK
EREDIIQKVSKKLGADIMRFVFSDLDEEKKIIKAPTISAEDLIRWYNLSL
LQTLLFKAYKLTVYVSSNWKEIIRRAKWLGLMYFAYDKPLRFEFLGPATL
VKLTEKYGRNLAVLLQFIISSQNWKIEAELVLGKKFKRVYKLKLANFKEL
KELVIDEKRFDSSVEEKFYKDFTNVIKGWKIIREPEPLVVDNRVFIPDFL
VEKGNLKVYVEIVGFWTKEYIKEKLDKLKKVKYPILILLNEELGKEKFNG
MNVITYKRKIDISLVYKWLRELE
3D structure
PDB6p4f Structural basis of the XPB helicase-Bax1 nuclease complex interacting with the repair bubble DNA.
ChainD
Resolution3.55 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.-.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna D P3 W4 R70 K233 P4 W5 R71 K234
BS02 dna D W4 F9 H58 R62 E204 K205 G232 Y239 W5 F10 H59 R63 E205 K206 G233 Y240
External links
PDB RCSB:6p4f, PDBe:6p4f, PDBj:6p4f
PDBsum6p4f
PubMed32986831
UniProtQ970I1|BAX1_SULTO Endonuclease Bax1 (Gene Name=bax1)

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