Structure of PDB 6ncp Chain D

Receptor sequence

>6ncpD (length=212) Species: 9606 (Homo sapiens) [Search protein sequence]

AIRMTQSPSSLSASVGDRVTITCQASQDIKKSLNWYRQKPGKAPELLIHD
ASILQTGVPSAFTASGSGTHFSFVINKLQPEDVGTYFCQEYENLQFTFGP
GTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV
DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNRG

3D structure

PDB

6ncp Conformational Plasticity in the HIV-1 Fusion Peptide Facilitates Recognition by Broadly Neutralizing Antibodies.

Chain

Resolution

2.76 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	S9 S10 S12 K103 E105 E143	S9 S10 S12 K103 E105 E143

External links

PDB	RCSB:6ncp, PDBe:6ncp, PDBj:6ncp
PDBsum	6ncp
PubMed	31194940

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