Structure of PDB 6n4d Chain D

Receptor sequence
>6n4dD (length=388) Species: 11309 (unidentified influenza virus) [Search protein sequence]
LEYRNWSKPQCQITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDHSKCYQ
FALGQGTTLNNKHSNSTIHDRTSHRTLLMNELGVPFHLGTKQVCIAWSSS
SCHDGKAWLHVCVTGDDRNATASFVYNGMLVDSIGSWSRNILRTQESECV
CINGTCTVVMTDGSASGRADTRILFIREGKIIHISPLSGSAQHIEECSCY
PRYPNVRCVCRDNWKGSNRPVIDINMADYNINSSYVCSGLVGDTPRNDDS
SSSSNCKDPNNERGNPGVKGWAFDNDNDVWMGRTISKDLRSGYETFKVIG
GWTTANSKSQVNRQVIVDNNNWSGYSGIFSVEGKSCVNRCFYVELIRGGP
QETRVWWTSNSIVVFCGTSGTYGTGSWPDGANINFMPI
3D structure
PDB6n4d Assessment of Molecular, Antigenic, and Pathological Features of Canine Influenza A(H3N2) Viruses That Emerged in the United States.
ChainD
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.18: exo-alpha-sialidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BMA D Q391 V392 R394 Q310 V311 R313
BS02 MAN D Q391 R394 Q310 R313
BS03 CA D D293 G297 D324 G345 P347 D212 G216 D243 G264 P266
Gene Ontology
Molecular Function
GO:0004308 exo-alpha-sialidase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0046761 viral budding from plasma membrane
Cellular Component
GO:0016020 membrane
GO:0033644 host cell membrane
GO:0055036 virion membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6n4d, PDBe:6n4d, PDBj:6n4d
PDBsum6n4d
PubMed28934454
UniProtA0A0H3YBU9

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