Structure of PDB 6mut Chain D

Receptor sequence
>6mutD (length=267) Species: 342948 (Thermococcus onnurineus) [Search protein sequence]
MDRRFYGKIVIKGKIKAVTGLHIGSQANPVIKDPHTGLPYIPGSSLKGRL
RSLFEILVNSRLGEWREKYPSLANYSPGSCRPDNQENCGKFFNRKINRGW
IHVCPDYETALACPVCRLFGASGKESNFPSRIIVRDAFLTKEWEEKWRAG
EAITEAKIEPRTNERVVAGAEFEFEIIYNVENTTHWRDDIKNLLTAMALL
EDSYLGGSGSRGYGKVKFIFDSFEFRPLDYYRTGKDEDIVSIDAREKSVS
DILSGFDSLFSEVEGKL
3D structure
PDB6mut Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
ChainD
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D Q26 S53 S54 K56 G57 R58 R60 G129 A130 S131 N136 S139 E168 R181 Y224 G227 S228 R231 Q26 S44 S45 K47 G48 R49 R51 G120 A121 S122 N127 S130 E159 R161 Y204 G207 S208 R211
BS02 rna D N37 R107 K133 R181 N28 R98 K124 R161
BS03 ZN D H111 C113 C122 C125 H102 C104 C113 C116
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0004519 endonuclease activity
Biological Process
GO:0051607 defense response to virus

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Molecular Function
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Biological Process
External links
PDB RCSB:6mut, PDBe:6mut, PDBj:6mut
PDBsum6mut
PubMed30503773
UniProtB6YWC0

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