Structure of PDB 6kns Chain D

Receptor sequence
>6knsD (length=240) Species: 1423 (Bacillus subtilis) [Search protein sequence]
DPMKVTVIGCYGGFPAANEATSGYLFQSGDYSLLVDCGSAVLSKLFGYVP
AEKLDAVILSHYHHDHIADIGPLQFAKQVKGEHTLPIYGHDADIEQFQKL
TYKTHTKGIAFQPDQPLTAGPFTITFLKTIHPVTCYAMRITDGSHTVVYT
ADSSYQDSFIPFSENADLLISECNFYADQDGTSAGHMNSLEAGRIAKEAG
AGELLLTHLPHFGVHDNLRKEAKTVFSGEVNIAKSGFVWE
3D structure
PDB6kns Structural and biochemical analyses of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis.
ChainD
Resolution2.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA D D28 K51 D53 D30 K53 D55
BS02 ZN D D63 H64 D155 H211 D65 H66 D152 H208
BS03 ZN D H59 H61 H134 D155 H61 H63 H131 D152
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042781 3'-tRNA processing endoribonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0042780 tRNA 3'-end processing

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Molecular Function
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Biological Process
External links
PDB RCSB:6kns, PDBe:6kns, PDBj:6kns
PDBsum6kns
PubMed31481231
UniProtE0TYN8

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