Structure of PDB 6klx Chain D

Receptor sequence
>6klxD (length=368) Species: 1502 (Clostridium perfringens) [Search protein sequence]
EDLDTDNDNIPDAYEKNGYTIKDSIAVKWNDSFAEQGYKKYVSSYLESNT
AGDPYTDYQKASGSIDKAIKLEARDPLVAAYPVVGVGMENLIISTNEHAS
SDQGKTVSRATTVQDSNGESWNTGLSINKGESAYINANVRYYNTGTAPMY
KVTPTTNLVLDGETLATIKAQDNQIGNNLSPNETYPKKGLSPLALNTMDQ
FNARLIPINYDQLKKLDSGKQIKLETTQVSGNYGTKNSQGQIITEGNSWS
NYISQIDSVSASIILDTGSQTFERRVAAKEQGNPEDKTPEITIGEAIKKA
FSATKNGELLYFNGIPIDESCVELIFDDNTSEIIKEQLKYLDDKKIYNVK
LERGMNILIKVPSYFTNF
3D structure
PDB6klx Cryo-EM structures reveal translocational unfolding in the clostridial binary iota toxin complex.
ChainD
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA D D221 D223 E230 S259 E262 D272 D6 D8 E15 S44 E47 D57
BS02 CA D D219 D221 D223 I225 E230 D4 D6 D8 I10 E15
Gene Ontology
Biological Process
GO:0051260 protein homooligomerization
Cellular Component
GO:0005576 extracellular region

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Biological Process
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Cellular Component
External links
PDB RCSB:6klx, PDBe:6klx, PDBj:6klx
PDBsum6klx
PubMed32123390
UniProtQ46221

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