Structure of PDB 6klw Chain D

Receptor sequence
>6klwD (length=406) Species: 1502 (Clostridium perfringens) [Search protein sequence]
EDLDTDNDNIPDAYEKNGYTIKDSIAVKWNDSFAEQGYKKYVSSYLESNT
AGDPYTDYQKASGSIDKAIKLEARDPLVAAYPVVGVGMENLIISTNEHAS
SDQGKTVSRATTNSKTDANTVGVSISAGYQNGFTGNITTSYSHTTDNSTA
VQDSNGESWNTGLSINKGESAYINANVRYYNTGTAPMYKVTPTTNLVLDG
ETLATIKAQDNQIGNNLSPNETYPKKGLSPLALNTMDQFNARLIPINYDQ
LKKLDSGKQIKLETTQVSGNYGTKNSQGQIITEGNSWSNYISQIDSVSAS
IILDTGSQTFERRVAAKEQGNPEDKTPEITIGEAIKKAFSATKNGELLYF
NGIPIDESCVELIFDDNTSEIIKEQLKYLDDKKIYNVKLERGMNILIKVP
SYFTNF
3D structure
PDB6klw Cryo-EM structures reveal translocational unfolding in the clostridial binary iota toxin complex.
ChainD
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA D D221 D223 E230 S259 E262 S263 D272 D6 D8 E15 S44 E47 S48 D57
BS02 CA D D219 D221 D223 I225 E230 D4 D6 D8 I10 E15
Gene Ontology
Biological Process
GO:0051260 protein homooligomerization
Cellular Component
GO:0005576 extracellular region

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Biological Process
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Cellular Component
External links
PDB RCSB:6klw, PDBe:6klw, PDBj:6klw
PDBsum6klw
PubMed32123390
UniProtQ46221

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