Structure of PDB 6k5h Chain D

Receptor sequence
>6k5hD (length=288) Species: 763924 (Phytophthora capsici LT1534) [Search protein sequence]
PTHSDGTVLHLGLRAGQVANRIVSVGSLGRAKVLAQLLDEGHFETFESAR
GFTTYSGKVKGVPVSIVATGMGVPNMDFVVRETRAVVNGPMTIIRFGTCG
AVREEVPPGSVVVNGKGSIMVTRNPDAFFPGASEEDCYRVSRVMPSSSTL
SKALVASMEDKLTALRAEPVIAASSDCDALRVFDGLNATACSFYSSQGRL
DSNFDDRNEKLVEDLTTAHPDLYTVEMETFHLLDLAQRSRGSIQATAAVL
VVANRLSGQIVESEVLEALESFWGGVVLQTIVSTPLDA
3D structure
PDB6k5h Structural and catalytic analysis of two diverse uridine phosphorylases in Phytophthora capsici.
ChainD
Resolution2.503 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.2.3: uridine phosphorylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 R1P D H19 R59 H10 R50
BS02 URA D F202 Q206 R208 F193 Q197 R199
BS03 R1P D G35 M80 R104 T107 F202 M236 E237 G26 M71 R95 T98 F193 M227 E228
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004850 uridine phosphorylase activity
GO:0016757 glycosyltransferase activity
GO:0047847 deoxyuridine phosphorylase activity
Biological Process
GO:0006218 uridine catabolic process
GO:0009116 nucleoside metabolic process
Cellular Component
GO:0005829 cytosol

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Cellular Component
External links
PDB RCSB:6k5h, PDBe:6k5h, PDBj:6k5h
PDBsum6k5h
PubMed32493959
UniProtA0A410UCT3

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