Structure of PDB 6k0a Chain D

Receptor sequence
>6k0aD (length=226) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence]
RIDINRIEKEEDIKLLKELKWNGFVFYQYDDEFSKDRYEEVKAIAESYKL
KVYSGVKIKTESSKQLRDKVKKFRNKCHIILIEGGVLKINRAAVELHDVD
ILSTPELGRKDSGIDHVLARLASNHRVAIELNFKTLLNKDGYERARTLLF
FRNNLKLAKKFDVPVVISTDAENKYQIKNPYDLRAFLNTLVEPLYAKKIM
ETAYKICDFRDYLMRDNVVRYGVEII
3D structure
PDB6k0a Cryo-electron microscopy structure of an archaeal ribonuclease P holoenzyme.
ChainD
Resolution4.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.26.5: ribonuclease P.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D K21 K52 Y182 R185 K20 K51 Y181 R184
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0004526 ribonuclease P activity
Biological Process
GO:0001682 tRNA 5'-leader removal
GO:0008033 tRNA processing
Cellular Component
GO:0005737 cytoplasm
GO:0030677 ribonuclease P complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6k0a, PDBe:6k0a, PDBj:6k0a
PDBsum6k0a
PubMed31197137
UniProtQ58539|RNP3_METJA Ribonuclease P protein component 3 (Gene Name=rnp3)

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