Structure of PDB 6jni Chain D

Receptor sequence
>6jniD (length=145) Species: 303 (Pseudomonas putida) [Search protein sequence]
MKIGELAKATDCAVETIRYYEREQLLPEPARSDGNYRLYTQAHVERLTFI
RNCRTLDMTLDEIRSLLRLRDSPDDSCGSVNALIDEHIEHVQARIDGLVA
LQEQLVELRRRCNAQGAECAILQQLETNGAVSVPETEHSHVGRSH
3D structure
PDB6jni Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
ChainD
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D E15 T16 Y19 Y20 G34 Y36 R51 R54 T59 L60 E15 T16 Y19 Y20 G34 Y36 R51 R54 T59 L60
BS02 dna D I3 G4 R18 R31 N35 Y36 R37 I3 G4 R18 R31 N35 Y36 R37
BS03 dna D P27 A42 H43 D71 P27 A42 H43 D71
BS04 ZN D C112 C119 C112 C119
BS05 ZN D E62 H87 H90 H140 E62 H87 H90 H140
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0045893 positive regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:6jni, PDBe:6jni, PDBj:6jni
PDBsum6jni
PubMed31548408
UniProtQ93TP7

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