Structure of PDB 6j2p Chain D

Receptor sequence
>6j2pD (length=92) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
GEDVYCICKRPDYGELMVGCDGCDDWFHFTCLHIPEQFKDLVFSFYCPYC
QAGITGKEGSLPKTLWKRKCRISDCYKPCLQDSKYCSEEHGR
3D structure
PDB6j2p Structural basis for histone H3K4me3 recognition by the N-terminal domain of the PHD finger protein Spp1.
ChainD
Resolution2.85 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y24 G33 L35 M36 D43 W45 V61 F62 Y5 G14 L16 M17 D24 W26 V42 F43
BS02 ZN D C25 C27 H47 C50 C6 C8 H28 C31
BS03 ZN D C39 C66 C69 C20 C47 C50
BS04 ZN D C93 C98 C109 C70 C75 C86
Gene Ontology
Cellular Component
GO:0048188 Set1C/COMPASS complex

View graph for
Cellular Component
External links
PDB RCSB:6j2p, PDBe:6j2p, PDBj:6j2p
PDBsum6j2p
PubMed31253666
UniProtQ03012|SPP1_YEAST COMPASS component SPP1 (Gene Name=SPP1)

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