Structure of PDB 6giq Chain D

Receptor sequence
>6giqD (length=248) Species: 580240 (Saccharomyces cerevisiae W303) [Search protein sequence]
MTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVA
WRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPN
EQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPG
SNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEP
EHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPKPRK
3D structure
PDB6giq Cryo-EM structure of the yeast respiratory supercomplex.
ChainD
Resolution3.23 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 7.1.1.8: quinol--cytochrome-c reductase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM D V100 C101 C104 H105 P175 R184 F218 A224 M225 V39 C40 C43 H44 P114 R123 F157 A163 M164
Gene Ontology
Molecular Function
GO:0008121 ubiquinol-cytochrome-c reductase activity
GO:0009055 electron transfer activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c
GO:0045333 cellular respiration
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005758 mitochondrial intermembrane space
GO:0005829 cytosol
GO:0045275 respiratory chain complex III

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Cellular Component
External links
PDB RCSB:6giq, PDBe:6giq, PDBj:6giq
PDBsum6giq
PubMed30598556
UniProtP07143|CY1_YEAST Cytochrome c1, heme protein, mitochondrial (Gene Name=CYT1)

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