Structure of PDB 6gej Chain D

Receptor sequence
>6gejD (length=80) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
RDNIQGITKPAIRRLARRGGVKRISGLIYEEVRAVLKSFLESVIRDSVTY
TEHAKRKTVTSLDVVYALKRQGRTLYGFGG
3D structure
PDB6gej Structure and dynamics of the yeast SWR1-nucleosome complex.
ChainD
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D P32 R36 P10 R14
BS02 dna D R35 R45 I46 S47 R78 T80 R13 R23 I24 S25 R56 T58
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0042802 identical protein binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006325 chromatin organization
GO:0006334 nucleosome assembly
GO:0006355 regulation of DNA-templated transcription
GO:0042790 nucleolar large rRNA transcription by RNA polymerase I
GO:0045943 positive regulation of transcription by RNA polymerase I
Cellular Component
GO:0000500 RNA polymerase I upstream activating factor complex
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome
GO:0031298 replication fork protection complex
GO:0032991 protein-containing complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6gej, PDBe:6gej, PDBj:6gej
PDBsum6gej
PubMed30309918
UniProtP02309|H4_YEAST Histone H4 (Gene Name=HHF1)

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