Structure of PDB 6fms Chain D

Receptor sequence
>6fmsD (length=149) Species: 208964 (Pseudomonas aeruginosa PAO1) [Search protein sequence]
PWLWITVLVFVLDQVSKAFFQAELSMYQQIVVIPDLFSWTLAYNTGAAFS
FLADSSGWQRWLFALIAIVVSASLVVWLKRLKKGETWLAIALALVLGGAL
GNLYDRMVLGHVVDFILVHWQNRWYFPAFNLADSAITVGAVMLALDMFR
3D structure
PDB6fms In situ serial crystallography for rapid de novo membrane protein structure determination.
ChainD
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.23.36: signal peptidase II.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D N54 A57 N112 R116 V122 D124 D143 I146 N44 A47 N102 R106 V112 D114 D133 I136
Gene Ontology
Molecular Function
GO:0004190 aspartic-type endopeptidase activity
Biological Process
GO:0006465 signal peptide processing
GO:0006508 proteolysis
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6fms, PDBe:6fms, PDBj:6fms
PDBsum6fms
PubMed30272004
UniProtQ9HVM5|LSPA_PSEAE Lipoprotein signal peptidase (Gene Name=lspA)

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