Structure of PDB 6fkw Chain D

Receptor sequence
>6fkwD (length=576) Species: 1156937 (Methylacidiphilum fumariolicum SolV) [Search protein sequence]
NDELIKLEKEPGQWVMQNKNYANTRYSELNQINTKNVSRLRLAWSFSTGA
LRGHEGGPLVVGTTMYVHSAYPNHVYALDLTQKPYAIKWQYTPVQNSQAV
AVACCDVVNRGLAYANGKIFMTTLDGQIIALDANTGKELWKMKHADVTKG
ETITGAPLVVKDKVLVGVSGGEFGVRGRVGAYDINTGNRVWLAYSQGPDE
EVLLDSDFNKEFPQHGGPGDGTKTWPGEQWKLGGGTTWGWYSYDPALDLF
YYGTSNPGTWNAEQRKGGDNKWSCTIFARRPDTGKARWAYQMTPWDSWDY
DGVNEMILPDLTVKGKKTPCLVHFDRNGFGYVLDRRTGQLIEAQPFVYVN
WAKEISKENDRPVEIPEKRTKQGVDTKGICPNSMGGKDQQPAAFSPQTGL
FYVPTNNMCMNYEGVEATYTAGAPYVGANVLMYSGHEGKDDYYGAFICYD
ALKGKRVWEIHEHFPVWSGPVVTAGGLAFYGTMDGWFKAVDIKTGKVLWQ
QKLGSGIIGNPITFLGPDKKQYVAVYSGVGGWFGIAVAQNLPPDDPYAGL
GAVGVAYQAGLPKATTVGGELYVFAL
3D structure
PDB6fkw Similar but not the same: First Kinetic and Structural Analyses of a Methanol Dehydrogenase Containing a Europium Ion in the Active Site.
ChainD
Resolution1.4 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) E172 N256 D299
Catalytic site (residue number reindexed from 1) E172 N256 D299
Enzyme Commision number 1.1.2.7: methanol dehydrogenase (cytochrome c).
1.1.2.8: alcohol dehydrogenase (cytochrome c).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 EU D E172 N256 D299 D301 E172 N256 D299 D301
BS02 PQQ D E55 C104 C105 R110 T154 S169 G170 G171 E172 T236 W238 D301 R326 D388 W467 G531 W532 E55 C104 C105 R110 T154 S169 G170 G171 E172 T236 W238 D301 R326 D388 W467 G531 W532
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0016491 oxidoreductase activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0046872 metal ion binding
GO:0052933 alcohol dehydrogenase (cytochrome c(L)) activity
GO:0052934 alcohol dehydrogenase (cytochrome c) activity
Biological Process
GO:0015945 methanol metabolic process
Cellular Component
GO:0016020 membrane
GO:0042597 periplasmic space

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6fkw, PDBe:6fkw, PDBj:6fkw
PDBsum6fkw
PubMed29524328
UniProtI0JWN7

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