Structure of PDB 6epz Chain D

Receptor sequence
>6epzD (length=671) Species: 358 (Agrobacterium tumefaciens) [Search protein sequence]
AFETTTPPEPPQFPAEGKINYVARDTILEFKALPSYSEPDWITEKFEKAG
KLPPLKERLPEEPLVYKTGNMPDGVGVYGDTMRHVVGGRPEGWNYIAGQS
QGWGGIDIALSECLTRTAPLFQVDAKDTEPLPNLAKSWEWSEDGHTLTMH
LVKGAKWSDGEAFNADDVMFYWEDAVVDPNVSPLGGGASPEAFGEGTTLK
KIDDYTVEWTFKAAFPKQYLYTMAYPSFCPGPSHILKPQHPKYSKNTYNQ
FKNAFPPEYMNMPVMGAWVPVSYRPDDLIVLRRNPYYWKVDEKGQQLPYL
NEVHYKLSTWADRDVQAVAGSGDFSNLEQPENFVASLKRAADPNAPARLA
FGPRLIGYNLQMNFSANGWGNPDERGQAIRELNRNEVFRQAVTSALDRKA
IGDSLVKGPFTAIYPGGISSGTSFYDRASTVYYPFNLEGAKAALASIGLK
DTDGDGFLNFPKETLGGRNVEITLLVNNGYATDKSLAEGLVGQMAKLGLR
VVIHSLDSNQRDAAHYGGQFDWLVRRNSTELSSVVQNTEQLAPVGPRTSW
NHRSPEGKELDLMPFEKEMADIVRKFISSQDNAERADLMKQYQKVYTQNL
YTIGLTEYPGALIVNKRFSNVPQGTPIFMFNWAEDAIIRERLWVAADKQG
KYELFPQQLPGKPGEGGPINH
3D structure
PDB6epz The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
ChainD
Resolution1.8 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC D W110 Y487 W639 W103 Y480 W632
BS02 GLA D G111 W317 R320 N333 E335 Y487 R533 W639 E641 G104 W310 R313 N326 E328 Y480 R526 W632 E634
BS03 MG D E168 A169 E161 A162
External links