Structure of PDB 6ebz Chain D

Receptor sequence
>6ebzD (length=313) [Search protein sequence]
KNYYDRSVSPVEYAYFDQSQNMRAINWNKIVDEKDLEVWNRVTQNFWLPE
NIPVSNDLPSWNELDDDWQQLITRTFTGLTLLDTVQSSIGDVAQIKNSLT
EQEQVIYANFAFMVGVHARSFGTIFSTLCTSEQIEEAHEWVVDNEALQAR
PKALIPFYTADDPLKSKIAAALMPGFLLYGGFYLPFYLSARGKLPNTSDI
IRLILRDKVIHNFYSGYKYQLKVAKLSPEKQAEMKQFVFDLLDKMIGLEK
TYLHQLYDGFGLADEAIRFSLYNAGKFLQNLGYESPFTKEETRIAPEVFA
QLSARADENHDFF
3D structure
PDB6ebz Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.
ChainD
Resolution1.66 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.17.4.1: ribonucleoside-diphosphate reductase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA D G263 D266 E267 G261 D264 E265
Gene Ontology
Molecular Function
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0009263 deoxyribonucleotide biosynthetic process
Cellular Component
GO:0005971 ribonucleoside-diphosphate reductase complex
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ebz, PDBe:6ebz, PDBj:6ebz
PDBsum6ebz
PubMed30224458
UniProtF2I8X9

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