Structure of PDB 6e90 Chain D

Receptor sequence
>6e90D (length=336) Species: 9606 (Homo sapiens) [Search protein sequence]
ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEELTEIINHE
NVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHL
KANATGISLIKGVDEGPLKLISEVIGERLGIPMSVLMGANIASEVADEKF
CETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGA
GFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADL
ITTCYGGRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQ
HKGLVDKFPLFMAVYKVCYEGQPVGEFIHCLQNHPE
3D structure
PDB6e90 Human Glycerol 3-Phosphate Dehydrogenase: X-ray Crystal Structures That Guide the Interpretation of Mutagenesis Studies.
ChainD
Resolution2.05 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.1.1.8: glycerol-3-phosphate dehydrogenase (NAD(+)).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PO4 D E134 D195 F242 C243 E123 D184 F231 C232
Gene Ontology
Molecular Function
GO:0004368 glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0005515 protein binding
GO:0016491 oxidoreductase activity
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042803 protein homodimerization activity
GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
GO:0051287 NAD binding
GO:0141152 glycerol-3-phosphate dehydrogenase (NAD+) activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006072 glycerol-3-phosphate metabolic process
GO:0006094 gluconeogenesis
GO:0006116 NADH oxidation
GO:0006127 glycerophosphate shuttle
GO:0006734 NADH metabolic process
GO:0045821 positive regulation of glycolytic process
GO:0046168 glycerol-3-phosphate catabolic process
GO:0046486 glycerolipid metabolic process
GO:0071320 cellular response to cAMP
GO:0071356 cellular response to tumor necrosis factor
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0070062 extracellular exosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6e90, PDBe:6e90, PDBj:6e90
PDBsum6e90
PubMed30640445
UniProtP21695|GPDA_HUMAN Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic (Gene Name=GPD1)

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