Structure of PDB 6dzg Chain D

Receptor sequence
>6dzgD (length=288) Species: 266834 (Sinorhizobium meliloti 1021) [Search protein sequence]
GSRAVELEIDGRSRIFDIDDPDLPKWIDEEAFRSDDYPYKKKLDREEYEE
TLTKLQIELVKVQFWMQATGKRVMAVFEGRDAAGKGGAIHATTANMNPRS
ARVVALTKPTETERGQWYFQRYVATFPTAGEFVLFDRSWYNRAGVEPVMG
FCTPDQYEQFLKEAPRFEEMIANEGIHLFKFWINIGREMQLKRFHDRRHD
PLKIWKLSPMDIAALSKWDDYTGKRDRMLKETHTEHGPWAVIRGNDKRRS
RINVIRHMLTKLDYDGKDEAAIGEVDEKILGSGPGFLR
3D structure
PDB6dzg Structural insights into substrate selectivity and activity of bacterial polyphosphate kinases
ChainD
Resolution1.87 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMP D R149 F163 S220 M222 R137 F151 S208 M210
Gene Ontology
Molecular Function
GO:0008976 polyphosphate kinase activity
GO:0016301 kinase activity
GO:0042802 identical protein binding
Biological Process
GO:0006754 ATP biosynthetic process
GO:0006793 phosphorus metabolic process
GO:0016310 phosphorylation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6dzg, PDBe:6dzg, PDBj:6dzg
PDBsum6dzg
PubMed
UniProtQ92SA6|PK21A_RHIME ADP-polyphosphate phosphotransferase 1 (Gene Name=SMc02148)

[Back to BioLiP]