Structure of PDB 6c6s Chain D

Receptor sequence
>6c6sD (length=161) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
QSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLF
PNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKP
KDIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIK
HSVKNTEFRKL
3D structure
PDB6c6s Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators.
ChainD
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D R11 Q24 R40 T68 N70 A71 T72 R73 G74 V75 R10 Q23 R39 T67 N69 A70 T71 R72 G73 V74
BS02 dna D G12 Q13 R40 G11 Q12 R39
Gene Ontology
Molecular Function
GO:0001000 bacterial-type RNA polymerase core enzyme binding
GO:0001073 transcription antitermination factor activity, DNA binding
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0008494 translation activator activity
GO:0061980 regulatory RNA binding
Biological Process
GO:0006354 DNA-templated transcription elongation
GO:0006355 regulation of DNA-templated transcription
GO:0031564 transcription antitermination
GO:0045727 positive regulation of translation
GO:0140673 transcription elongation-coupled chromatin remodeling
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6c6s, PDBe:6c6s, PDBj:6c6s
PDBsum6c6s
PubMed29887376
UniProtP0AFW0|RFAH_ECOLI Transcription antitermination protein RfaH (Gene Name=rfaH)

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