Structure of PDB 6b9r Chain D

Receptor sequence
>6b9rD (length=442) Species: 1888 (Streptomyces albus) [Search protein sequence]
SDAARAARAAALLRAAANDLKRNDRAAEADLGLPPGSFGDYVSGRLPITW
DLISRAAQAWPLNERDLLPIHNDTPQGLRMMRVKESEASSRIIERGGGPY
YEYRDTAMSRQASYRPEWISMLRVVEDDDPDNPLVEWNKGHLLYQFTYFV
GPVNYYFRSGGRSHCVPMNTGDSVWGLPFAPHSFTARSADEPAYILALTY
GGELTGDAQRELATFGRAVTSSLALTPGDHGAMLRSVMAARLTTVTELAD
RSGLKTDRVAALCRTPARAEWPELSALAEALGVSVRELLVPHTTTEADVR
IQPGRTASRWSYPGPDAPAYRFTQLAGDPLHPHTTSLAVDVLTARPDAPL
PPTYQHQYLYVLGEQPVSVRWRYNGEQYDGRLEPGDSAYVIPGIEFSLSA
EKPTELLMLRIGGSATPDVRFALGAMPDGAIGRYIAEDRLWY
3D structure
PDB6b9r Structural basis for methylphosphonate biosynthesis.
ChainD
Resolution1.802 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 2HE D K29 W449 K21 W441
BS02 FE D H149 H190 H141 H182
BS03 2HE D R103 Y109 Y111 N146 H149 H190 F192 R95 Y101 Y103 N138 H141 H182 F184
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 04:20:16 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6b9r', asym_id = 'D', title = 'Structural basis for methylphosphonate biosynthesis.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6b9r', asym_id='D', title='Structural basis for methylphosphonate biosynthesis.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003677', uniprot = '', pdbid = '6b9r', asym_id = 'D'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677', uniprot='', pdbid='6b9r', asym_id='D')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>