Structure of PDB 6b0p Chain D

Receptor sequence

>6b0pD (length=118) Species: 9606 (Homo sapiens) [Search protein sequence]

HMRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSD
QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSC
QKKFARSDELVRHHNMHQ

3D structure

PDB

6b0p Role for first zinc finger of WT1 in DNA sequence specificity: Denys-Drash syndrome-associated WT1 mutant in ZF1 enhances affinity for a subset of WT1 binding sites.

Chain

Resolution

2.077 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	dna	D	R321 F335 F364 R366 R372 H373 R376 R390 R394 H397 H401 T404 K420 R424 R430	R3 F17 F46 R48 R54 H55 R58 R72 R76 H79 H83 T86 K102 R106 R112
BS02	dna	D	H339 S367 K371 D396 K399 R430	H21 S49 K53 D78 K81 R112
BS03	ZN	D	C325 C330 H343 H347	C7 C12 H25 H29
BS04	ZN	D	C355 C360 H373 H377	C37 C42 H55 H59
BS05	ZN	D	C385 C388 H401 H405	C67 C70 H83 H87
BS06	ZN	D	C413 C418 H431 H435	C95 C100 H113 H117

External links

PDB	RCSB:6b0p, PDBe:6b0p, PDBj:6b0p
PDBsum	6b0p
PubMed	29294058
UniProt	P19544\|WT1_HUMAN Wilms tumor protein (Gene Name=WT1)

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