Structure of PDB 6axl Chain D

Receptor sequence

>6axlD (length=214) Species: 9606 (Homo sapiens) [Search protein sequence]

QMQLVESGGGVVQPGRSLRLSCTASGFTFSTYAMHWVRQSPGQGLQWVAV
ISYHSTNKYYEDSVRGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDG
YSSSFFDFWGQGTLVTVSSASTKGPSVFPLAPSGGTAALGCLVKDYFPEP
VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVN
HKPSNTKVDKKVEP

3D structure

PDB

6axl Structural basis for antibody recognition of the NANP repeats in Plasmodium falciparum circumsporozoite protein.

Chain

Resolution

2.4 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	A33 S52 Y52A N56 Y97 S98 S99 S100 F100A	A33 S52 Y53 N57 Y101 S102 S103 S104 F105
BS02	peptide	D	Y32 Y52A G96	Y32 Y53 G100

External links

PDB	RCSB:6axl, PDBe:6axl, PDBj:6axl
PDBsum	6axl
PubMed	29138320

[Back to BioLiP]