Structure of PDB 6avg Chain D

Receptor sequence
>6avgD (length=245) Species: 9606 (Homo sapiens) [Search protein sequence]
MDSGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQY
YNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSGGHTG
SNEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATG
FYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSAT
FWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
3D structure
PDB6avg Divergent T-cell receptor recognition modes of a HLA-I restricted extended tumour-associated peptide.
ChainD
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y36 S97 G98 S103 N104 Y34 S95 G96 S101 N102
External links
PDB RCSB:6avg, PDBe:6avg, PDBj:6avg
PDBsum6avg
PubMed29531227
UniProtA0A0B4J1U6|TVB9_HUMAN T cell receptor beta variable 9 (Gene Name=TRBV9)

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