Structure of PDB 5zy9 Chain D

Receptor sequence
>5zy9D (length=400) Species: 67593 (Phytophthora sojae) [Search protein sequence]
MDHRRLGVSEELFFFHSLSPGSGFWLPHGSAIYFKLLKFIREQYRARGYT
EVITPNIFNMELWNISGHAKHYKENMFVFDVEGQEYALKPMNCPAASLMF
DFRQRSYRELPIRYADCGVLHRNELSGALTGLTRVRRFQQDDAHIFCRDD
QIKKEVLDFLSFMKYVYDVFGIEFNLELSTRPEKAMGELEQWERAESQLA
EALDEFVGAGKWVVNPGDGAFYGPKIDIMITDALKRQHQCATVQLDFQLP
IRFNLKYRTDDADNFKRPVIIHRAIYGSLERFVAVLVEHYAGKFPFWLSP
RQVLIVTVGAAFVDYGYEVKDAMFRAGFDVDIDDTGKTLNKKIREGQMAH
YNFILVVGAHEKETRSVNIRTRDNKVTGTKTLEEAIAMFKELEETKAADE
3D structure
PDB5zy9 Structural basis for inhibition of translational functions on a tRNA synthetase
ChainD
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.1.1.3: threonine--tRNA ligase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 2CR D G67 H68 M91 R122 Y222 D246 H272 G67 H68 M91 R122 Y222 D246 H272
BS02 ZN D C93 H144 H272 C93 H144 H272
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004829 threonine-tRNA ligase activity
GO:0005524 ATP binding
Biological Process
GO:0006418 tRNA aminoacylation for protein translation
GO:0006435 threonyl-tRNA aminoacylation
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5zy9, PDBe:5zy9, PDBj:5zy9
PDBsum5zy9
PubMed
UniProtG3FIN0

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