Structure of PDB 5zuu Chain D

Receptor sequence
>5zuuD (length=147) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
SHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDSVEN
VILIFSVNRTRHFQGCAKMTSRIGRNFSVKWLKLCELSFHKTRNLRNPYN
ENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISIAAEAKREE
3D structure
PDB5zuu CPSF30-L-mediated recognition of mRNA m6A modification controls alternative polyadenylation of nitrate signaling-related gene transcripts in Arabidopsis.
ChainD
Resolution1.95 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.21.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D K243 S244 N245 N249 W259 A260 Q262 N286 R287 R289 K348 I349 S350 R351 D352 K15 S16 N17 N21 W31 A32 Q34 N58 R59 R61 K106 I107 S108 R109 D110
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:5zuu, PDBe:5zuu, PDBj:5zuu
PDBsum5zuu
PubMed33515769
UniProtA9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30 (Gene Name=CPSF30)

[Back to BioLiP]