Structure of PDB 5yln Chain D

Receptor sequence
>5ylnD (length=346) Species: 373153 (Streptococcus pneumoniae D39) [Search protein sequence]
GSMKAYTYVKPGLASFVDVDKPVIRKPTAIVRIVKTTICGTDLHIIKGDV
PTCQSGTILGHEGIGIVEEVGEGVSNFKKGDKVLISCVCACGKCYYCKKG
IYAHCEDEGGWIFIDGMQAEYLRVPHADNTLYHTPEDLSDEALVMLLPTG
YEIGVLKGKVEPGCSVAIIGSGPVGLAALLTAQFYSPAKLIMVDLDDNRL
ETALSFGATHKVNSSDPEKAIKEIYDLTDGRGVDVAIEAVGIPATFDFCQ
KIIGVDGTVANCGVHGKPVEFDLDKLWIRNINVTTGLVSTNTTPQLLKAL
ESHKIEPEKLVTHYFKLSEIEKAYEVFSKAADHHAKVIIENDISEA
3D structure
PDB5yln Zinc dependent alcohol dehydrogenase 2 from Streptococcus pneumonia - apo form
ChainD
Resolution2.189 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) C38 T40 H43 H60
Catalytic site (residue number reindexed from 1) C39 T41 H44 H61
Enzyme Commision number 1.1.1.1: alcohol dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN D C38 H60 C39 H61
BS02 ZN D C90 C93 C96 C104 C91 C94 C97 C105
Gene Ontology
Molecular Function
GO:0004022 alcohol dehydrogenase (NAD+) activity
GO:0008270 zinc ion binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5yln, PDBe:5yln, PDBj:5yln
PDBsum5yln
PubMed
UniProtA0A0H2ZRI0

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