Structure of PDB 5xqj Chain D

Receptor sequence
>5xqjD (length=884) Species: 5076 (Penicillium chrysogenum) [Search protein sequence]
FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTSELQSW
ATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVSSIVVTDNSDALT
VNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNR
ANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVV
RFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRF
AGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRL
KWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGAT
QGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHD
GLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDK
LASLTAYMNDPPVLVAEPKYIHETQALGEYWALPSPAAATLEDRLQFIFD
FYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLF
FWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDS
AKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRT
DGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAG
IANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVV
SEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSKISLLQAH
SRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPV
DEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
3D structure
PDB5xqj Crystal structure of exo-rhamnogalacturonan lyase from Penicillium chrysogenum as a member of polysaccharide lyase family 26
ChainD
Resolution2.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RAM D D460 Q646 R648 Q688 D420 Q603 R605 Q645
BS02 GAD D Y458 E587 R634 H635 R648 Y418 E544 R591 H592 R605
BS03 CA D D562 N585 H616 D621 H639 D519 N542 H573 D578 H596
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5xqj, PDBe:5xqj, PDBj:5xqj
PDBsum5xqj
PubMed29574769
UniProtB6H7Q7

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